BioPHP 1.0

Operating systemsOS : Windows / Linux / Mac OS / BSD / Solaris
Program licensingScript Licensing : GPL - GNU Public License
CreatedCreated : Aug 1, 2007
Size downloadDownloads : 12
Program licensing
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The BioPHP Project is a non-profit, open source ...

The php by Serge Gregorio Project is a non-profit, open source software project that aims to extend the PHP scripting language so it can be used to develop bioinformatics applications.
biophp 1.0 is NOT a bioinformatics application. Rather, it is a collection of tools to help PHP developers write bioinformatics applications more rapidly than if they had to start from scratch using "vanilla PHP".
It is primarily a tool for developing web-based bioinformatics applications.
Features:
- read biological data in the GenBank, Swissprot, Fasta, and Clustal ALN formats
- allows user to navigate data spread across several flat files.
- can do simple sequence analysis tasks such as computing molecular weights, translating codons to amino residues, generating the charge, chemgrp, consensus strings, etc.
- can look for patterns in sequences such as start and stop codons, mirrors and palindromes, and other more complex patterns (represented as regular expressions).
- can digest a nucleic sequence using one or more restriction enzymes or endonucleases.
- can interface with external programs such as Clustal, to align two or more nucleic or protein sequences

BioPHP 1.0 scripting tags: php, applications, biocomputing, biocomputing utility, bioinformatics, start, bio-informatics, bio-informatics tool, biocomputing tool, biophp. What is new in BioPHP 1.0 software script? - Unable to find BioPHP 1.0 news. What is improvements are expecting? Newly-made BioPHP 1.1 will be downloaded from here. You may download directly. Please write the reviews of the BioPHP. License limitations are unspecified.