Ulla 0.9.9.1

Operating systemsOS : Linux / Mac OS / BSD
Program licensingScript Licensing : Other Free / Open Source License - Cerative Commons License
CreatedCreated : Aug 27, 2009
Size downloadDownloads : 1
Program licensing
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It needs user inputted environmental class ...

It needs user inputted environmental class definitions and sequence alignments with the annotations for the environment classes.
This ruby app will work from a console-based environment.
It also has the ability to generate_heatmap for the outputted tables.
The following RubyGems will be automatically installed it the script:
narray
bio
Active Support
RMagick
Most important functions of Ulla by Semin Lee:
• Environment-specific substitution table generation based on user providing environmental class definition
• Entropy-based smoothing procedures to cope with sparse data problem
• BLOSUM-like weighting procedures using PID threshold
• Heat Map generation for substitution table
Demands:
• Ruby 1. 8. 7 or higher
rubygems 1. 2. 0 or higher
News in the current Ulla 0.9.9.1 version:
• Removed dependency on the Ruby Facets library
• Total -> total for compativility with melody

Ulla 0.9.9.1 scripting tags: rubygems, table, substitution, environment, bio-informatics application, environmental, generate heatmap, user, procedures, ulla. What is new in Ulla 0.9.9.1 software script? - Unable to find Ulla 0.9.9.1 news. What is improvements are expecting? Newly-made Ulla 0.10 will be downloaded from here. You may download directly. Please write the reviews of the Ulla. License limitations are unspecified.