Computational scripts download

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computational script overview « 1 - 30 » of 56 scripts

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... to provide easy access to efficient and reliable geometric algorithms to users in industry and academia in ... library.CGAL is used in various areas needing geometric computation, such as ... molecular biology, medical imaging, robotics and motion planning, mesh generation, numerical methods.The Computational Geometry Algorithms Library ...

... The very nature of microarrays, with unprecedented scalability in parallelizing experiments, leads to ... large quantities of measurement data. This project aims at providing ... useful tools for processing microarray data. ...

... This toolbox is designed for researchers in Computational Intelligence as well as application developers, students, and ... it is also in constant development and very easy to hack. Users of MATLAB ... Optimization Toolbox should feel right at home but even if ... use that toolbox this will be easy to figure. Extensive help is included.Anyone from serious ...

... It computes the Euclidean distances of every pair of points, whose coordinates are ... rows.It is particularly useful for distance-based classifiers, due to its limited computational cost.The program can be ... easily adapted to calculate Manhattan distance or any other distance metric. Demands ...

... useful logic programming purposes, artificial intelligence and computational linguistics. Most important functions of SWI-Prolog ... Portable to many platforms, including almost all Unix ... Linux platforms, Windows ... and many more. Both 32-bits and 64-bits hardware is supported. Sources are plain C99, configured ...

... It contains pre-built components for common bioinformatics analysis tasks.These components can be arranged graphically to form ... pipelines. Each analysis component supports multiple output formats, including the Bioinformatic Sequence Markup Language ... highly normalized, community-supported schema for storage of biological annotation data.It is written ...

... is an XML-based description language for representing computational models in systems biology and bio-informatics.It supports annotations ... and validation.SBMLeditor is written in JAVA using JCompneur, ... tree.News in the current SBMLeditor version:• Added support for SBML level ... keyboard shortcut to add ...

... is an XML-based description language for representing computational models in systems biology and bio-informatics.KEGG2SBML ... capabilities are currently limited to converting only KEGG Metabolic Pathway files and not other ... types of KEGG files.KEGG2SBML can convert KEGG Pathway Database Release 46.0 or later. ... Past releases of KEGG Pathway Database have not been tested and may not be ...

... The Systems Biology Markup Language (SBML) is an XML-based description language for representing computational ... models in systems biology and bio-informatics.SBMLToolbox provides functions for reading, writing, and validating SBML ... converting models into ... symbolic form suitable for use with MATLAB's Symbolic Math Toolbox ...

... The Systems Biology Markup Language (SBML) is an XML-based description language for representing computational ... models in systems biology and bio-informatics.MathSBML provides facilities for reading SBML models, converting them ... to systems of ordinary differential equations for simulation and plotting in Mathematica, and translating ... the models to other formats. It supports both Level ...

... dec2bin MATLAB tools.b2d takes ... binary number in the form of an array and calculates ... the equivalent decimal one. Nothing fancy, but quite effective as ... that needs to be efficient in terms of computational overhead.d2b is the symmetrical program, taking ... decimal number and providing the equivalent binary one, in the form of an array.Syntax ...

... versions are included in the download package.The Kepler State transition matrix provides ... from Cartesian coordinates to Kepler elements, progressing, and back ... .This procedure has been generalized and greatly optimized for computational ... algorithm is an order of magnitude faster that mentioned triple coordinate conversion, which makes it very well ...

... software package for computational modeling of neural maps.The object is to help scientists understand brain functions ... at the level of the topographic maps that make up sensory and motor systems.Topographica is ... internal behavior of neurons and small networks of them.Topographica instead focuses on the large-scale structure and function ...

... exact test, performs the exact probability test for ... are nonrandom associations between the two categorical variables. Barnard's exact test is used to calculate an exact ... P-value with small number of expected frequencies, for which the Chi-square test ... in case the total number of observations is less than 20 or the ...

... finite elements. The SEM is widely used in computational fluid dynamics and has been succesfully applied to ... problems in Seismology ranging from regional to global scale wave propagation and earthquake dynamics.SEMLAB is ... scripts intended for tutorial purposes. Problems solved include wave propagation and dynamic earthquake rupture in 1D and ...

... suite of scientific image processing tools aimed primarily at the transmission electron microscopy ... to be used in other fields as well. EMAN has ... task known as single particle reconstruction.In this method, images of nanoscale molecules and molecular assemblies embedded in ... transmission electron microscope, then processed using EMAN to produce ...

... Numarray provides array manipulation and computational capabilities similar to those found in IDL, Matlab, ... or Octave. Using numarray, it is possible to write many efficient numerical data processing applications directly in ... as well as doing such analysis interactively within Python or PyRAF ... that can read and write numarray arrays that can be called from Python. Numarray is ...

... time-domain electromagnetic simulation will take Maxwell ... and evolve them over time within some finite computational region, performing ... numerical experiment.Most important functions of Meep:• Simulation in 1d, 2d, 3d, and cylindrical coordinates. ... memory parallelism on any system supporting the MPI standard. Portable to any Unix-like system ...

... free, easy to use scientific data visualizer. It is written in Python and uses the ... amazing Visualization Toolkit (VTK) for the graphics. It provides ... amazing Visualization Toolkit (VTK) for the graphics. It provides ... Visualize computational grids. ...

... The High Dimensional Data Clustering ... toolbox contains an efficient unsupervised classifiers for high-dimensional data. This classifier is based on Gaussian models adapted ... for high-dimensional data.Reference: C. Bouveyron, S. Girard and C. Schmid, High-Dimensional ...

... NLTK, the Natural Language Toolkit, is ... of program modules, data sets and tutorials supporting research and teaching in computational linguistics and natural language ... processing. NLTK is ideally suited to students who are learning ... NLP (natural language processing ...

... nonlinear algorithm for controlling dynamical systems, particularly in regimes where linear control methods often ... .Four examples of the use of the algorithm are included -- the logistic equation, the Lorenz ... physical pendulum, and ... liquid bridge experiment -- and the algorithm can be easily extended to numerous other systems, ...

... Ghemical is computational chemistry package. Ghemical is implemented using the ... graphical user interface which utilizes the OpenGL graphics interface and the multiplatform widget GTK library. Here ... Ab Initio methods provided by MPQC. ... Semi-Empirical methods provided by MOPAC7. ...

... large lexical database of English. Nouns, verbs, adjectives and adverbs are ... Synsets are interlinked by means of conceptual-semantic and lexical relations. The resulting network of meaningfully related words ... and concepts can be navigated with the browser. WordNet is also freely and publicly available for download. ...

... The gSOAP Web services development toolkit offers an XML to ... language binding to ease the development of SOAP ... XML Web services in ... The gSOAP compiler generates efficient XML serializers for native and user-defined ...

... and for high volume and complex data.HDF5 is portable and is extensible, allowing applications to ... evolve in their use of HDF5.The HDF5 Technology suite includes tools and applications for managing, ... manipulating, viewing, and analyzing data in the HDF5 format. The HDF5 API, data model, file format, library, ...

... GIV is an image viewer based on the gtk_image_viewer widget. It was designed especially for scientific vision ... and computational geometry and has support for drawing vector graphics on top of the image. ...

... is broken up into tasks and run different events on different processors.It has two storage backends ... common redis server. Most important functions of Jug:• Persistent data across runs ... Re-use partial results if you change the algorithms ... main computation script and then write ...

... set of useful functions to deal with 3D surfaces meshed with interconnected triangles.The code is written entirely ... simple and efficient library to scientists dealing with 3D computational surface ... using fast adaptive floating point arithmetic ... Robust set operations on surfaces ...

... The Spherical Self-Organizing Feature Maps is ... contemporary technique for data clustering and visualization.The main advantages they offer are ... 1. Smooth training2. Implementation in arbitrary dimension without additional computational cost.3. Data visualization in ... be used to create glyphs from spherical Self-Organizing Feature Maps ...

Scripting computational programming is written in computer programming languages that is typically interpreted and can be typed directly from a keyboard. Computational scripts are often distinguished from executable files. This computational scripts are safe to use virus free and spyware free.

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